Publications of the Institute of Medical Physics and Biophysics in 2017

Authors:Tiemann JKS, Guixà-González R, Hildebrand PW, Rose AS

Title:MDsrv: viewing and sharing molecular dynamics simulations on the web

Journal:Nat Methods Year:2017; Volume:14Issue:(12):Pages:1123-1124. doi: 10.1038/nmeth.4497.

Authors:Yamamoto H, Unbehaun A, Spahn CMT

Title:Ribosomal Chamber Music: Toward an Understanding of IRES Mechanisms

Journal:Trends Biochem Sci Year:2017; Volume:42Issue:(8)

Authors:Said N1, Krupp F2, Anedchenko E1, Santos KF1, Dybkov O3, Huang YH1, Lee CT4,5, Loll B1, Behrmann E2, Bürger J2,6, Mielke T5, Loerke J2, Urlaub H4,5, Spahn CMT2, Weber G1, Wahl MC1,7.

Title:Structural basis for λN-dependent processive transcription antitermination

Journal:Nat Microbiol Year:2017; Volume:2:Pages:17062. doi: 10.1038/nmicrobiol.2017.62..

Authors:Scheerer P, Sommer ME

Title:Structural mechanism of arrestin activation

Journal:Curr Opin Struct Biol Year:2017; Volume:45:Pages:160-169. doi: 10.1016/j.sbi.2017.05.001. [Epub ahead of print] Review.

Authors:Lamparter T, Krauß N, Scheerer P

Title:Phytochromes from Agrobacterium fabrum

Journal:Photochem Photobiol Year:2017; Volume:93Issue:(3):Pages:642-655. doi: 10.1111/php.12761.

Authors:Smirnova J, Fernie AR, Spahn CMT, Steup M

Title:Photometric assay of maltose and maltose-forming enzyme activity by using 4-alpha-glucanotransferase (DPE2) from higher plants.

Journal:Anal Biochem Year:2017; Volume:532:Pages:72-82. doi: 10.1016/j.ab.2017.05.026. Epub 2017.

Authors:Kleinau G, Worth CL, Kreuchwig A, Biebermann H, Marcinkowski P, Scheerer P, Krause G

Title:Structural-Functional Features of the Thyrotropin Receptor: A Class A G-Protein-Coupled Receptor at Work

Journal:Front Endocrinol Year:2017; Volume:8Issue:(86):Pages:doi: 10.3389/fendo.2017.00086. eCollection 2017. Review.

Authors:Oberthuer D, Knoška J, Wiedorn MO, Beyerlein KR, Bushnell DA, Kovaleva EG, Heymann M, Gumprecht L, Kirian RA, Barty A, Mariani V, Tolstikova A, Adriano L, Awel S, Barthelmess M, Dörner K, Xavier PL, Yefanov O, James DR, Nelson G, Wang D, Calvey G, Chen Y, Schmidt A, Szczepek M, Frielingsdorf S, Lenz O, Snell E, Robinson PJ, Šarler B, Belšak G, Maček M, Wilde F, Aquila A, Boutet S, Liang M, Hunter MS, Scheerer P, Lipscomb JD, Weierstall U, Kornberg RD, Spence JC, Pollack L, Chapman HN, Bajt S

Title:Double-flow focused liquid injector for efficient serial femtosecond crystallography

Journal:Scientific Reports Rep Year:2017; Volume:16Issue:(7):Pages:44628. doi: 10.1038/srep44628.

Authors:Velázquez Escobar F, Buhrke D, Michael N, Sauthof L, Wilkening S, Tavraz NN, Salewski J, Frankenberg-Dinkel N, Mroginski MA, Scheerer P, Friedrich T, Siebert F, Hildebrandt P

Title:Common Structural Elements in the Chromophore Binding Pocket of the Pfr State of Bathy Phytochromes

Journal:Photochem Photobiol Year:2017; Volume:93Issue:(3):Pages:724-732. doi: 10.1111/php.12742.

Authors:Kacprzak S, Njimona I, Renz A, Feng J, Reijerse E, Lubitz W, Krauss N, Scheerer P, Nagano S, Lamparter T, Weber S

Title:Intersubunit distances in full-length, dimeric, bacterial phytochrome Agp1, as measured by pulsed electron-electron double resonance (PELDOR) between different spin label positions, remain unchanged upon photoconversion

Journal:J Biol Chem Year:2017; Volume:292Issue:(18):Pages:7598-7606.

Authors:Kalms J, Banthiya S, Galemou Yoga E, Hamberg M, Holzhutter HG, Kuhn H, Scheerer P

Title:The crystal structure of Pseudomonas aeruginosa lipoxygenase Ala420Gly mutant explains the improved oxygen affinity and the altered reaction specificity

Journal:Biochim Biophys Acta Year:2017; Volume:1862Issue:(5):Pages:463-473. doi: 10.1016/j.bbalip.2017.01.003.

Authors:Van Eps N, Caro LN, Morizumi T, Kusnetzow AK, Szczepek M, Hofmann KP, Bayburt TH, Sligar SG, Ernst OP, Hubbell WL

Title:Conformational equilibria of light-activated rhodopsin in nanodiscs

Journal:Proc Natl Acad Sci U S A Year:2017; Volume:114Issue:(16):Pages:E3268-E3275. doi: 10.1073/pnas.1620405114. Epub.

Authors:Lally CC, Bauer B, Selent J, Sommer ME

Title:C-edge loops of arrestin function as a membrane anchor

Journal:Nat Commun Year:2017; Volume:8Issue:(14258):Pages:doi: 10.1038/ncomms14258.

Authors:Guixà-González R, Albasanz JL, Rodriguez-Espigares I, Pastor M, Sanz F, Martí-Solano M, Manna M, Martinez-Seara H, Hildebrand PW, Martín M, Selent J

Title:Membrane cholesterol access into a G-protein-coupled receptor

Journal:Nat Commun Year:2017; Volume:8Issue:(14505):Pages:10.1038/ncomms14505.

Authors:Ma H, Zhang F, Ignatz E, Suehnel M, Xue P, Scheerer P, Essen L, Krauß N, Lamparter T

Title:Divalent Cations Increase DNA Repair Activities of Bacterial (6-4) Photolyases

Journal:Photochem Photobiol Year:2017; Volume:93Issue:(1):Pages:323-330. doi: 10.1111/php.12698.

Authors:Zhang F, Ma H, Bowatte K, Kwiatkowski D, Mittmann E, Qasem H, Krauss N, Zeng X, Ren Z, Scheerer P, Yang X, Lamparter T

Title:Crystal Structures of Bacterial (6-4) Photolyase Mutants with Impaired DNA Repair Activity

Journal:Photochem Photobiol Year:2017; Volume:93Issue:(1):Pages:304-314. doi: 10.1111/php.12699.