Publications of the Institute of Medical Physics and Biophysics in 2015

Authors:Graf D, Wesslowski J, Ma H, Scheerer P, Krauß N, Oberpichler I, Zhang F, Lamparter T

Title:Key Amino Acids in the Bacterial (6-4) Photolyase PhrB from Agrobacterium fabrum

Journal:PLoS One Year:2015; Volume:10Issue:(10):Pages:e0140955. doi: 10.1371/journal.pone.0140955. eCollection 2015.

Authors:Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Bürger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CM

Title:Molecular architecture of the ribosome-bound Hepatitis C Virus internal ribosomal entry site RNA

Journal:EMBO J Year:2015; Volume:34Issue:(24):Pages:3042-58. doi: 10.15252/embj.201592469..

Authors:Rose AS, Zachariae U, Grubmüller H, Hofmann KP, Scheerer P, Hildebrand PW

Title:Role of Structural Dynamics at the Receptor G Protein Interface for Signal Transduction

Journal:PLoS One Year:2015; Volume:10Issue:(11):Pages:e0143399. doi: 10.1371/journal.pone.0143399. eCollection 2015.

Authors:Prade E., Bittner H.J., Sarkar R., Amo J.M.L., Althoff-Ospelt G., Hildebrand P.W. and Reif B

Title:Structural mechanism of the interaction of Alzheimer's disease Aβ fibrils with the NSAID sulindac sulfide

Journal:JBC Year:2015; Volume:290Issue:(48):Pages:28737-45. doi: 10.1074/jbc.M115.675215.

Authors:Brehm, A., et al., Hildebrand P.W., Brogan P., Krüger E., Aksentijevich I., Goldbach-Mansky R

Title:Diverse proteasome subunit mutations link proteasome dysfunction and Type I

Journal:J Clin Invest Year:2015; Volume:125Issue:(11):Pages:4196-211.

Authors:Siebert E, Rippers Y, Frielingsdorf S, Fritsch J, Schmidt A, Kalms J, Katz S, Lenz O, Scheerer P, Paasche L, Pelmenschikov V, Kuhlmann U, Mroginski MA, Zebger I, Hildebrandt P

Title:Resonance Raman Spectroscopic Analysis of the [NiFe] Active Site and the Proximal [4Fe-3S] Cluster of an O2-Tolerant Membrane-Bound Hydrogenase in the Crystalline State

Journal:J Phys Chem B Year:2015; Volume:119Issue:(43):Pages:13785-96. doi: 10.1021/acs.jpcb.5b04119. Epub 2015 Aug 7.

Authors:Lohse MJ, Hofmann KP

Title:Spatial and Temporal Aspects of Signaling by GPCRs

Journal:Mol Pharmacol Year:2015; :Pages:pii: mol.115.100248.

Authors:Oestereich F, Bittner HJ, Weise C, Grohmann L, Janke LK, Hildebrand PW, Multhaup G, Munter LM

Title:Impact of amyloid precursor protein hydrophilic transmembrane residues on amyloid-beta generation

Journal:Biochemistry Year:2015; Volume:54Issue:(17):Pages:2777-84.

Authors:Beyrière F, Sommer ME, Szczepek M, Bartl FJ, Hofmann KP, Heck M, Ritter E

Title:Formation and decay of the arrestin•rhodopsin complex in native disc membranes

Journal:J Biol Chem Year:2015; Volume:290Issue:(20):Pages:12919-28.

Authors:Lally CC, Sommer ME

Title:Quantification of arrestin-rhodopsin binding stoichiometry

Journal:Methods Mol Biol Year:2015; Volume:1271:Pages:235-50.

Authors:Hilal T, Spahn CM

Title:Ribosome rescue and protein quality control in concert

Journal:Mol Cell Year:2015; Volume:57Issue:(3):Pages:389-90.

Authors:Kirmizialtin S, Loerke J, Behrmann E, Spahn CM, Sanbonmatsu KY4

Title:Using Molecular Simulation to Model High-Resolution Cryo-EM Reconstructions

Journal:Methods Enzymol Year:2015; Volume:558:Pages:497-514.

Authors:Kazmin R, Rose A, Szczepek M, Elgeti M, Ritter E, Piechnick R, Hofmann KP, Scheerer P, Hildebrand PW, Bartl FJ

Title:The activation pathway of human rhodopsin in comparison to bovine rhodopsin

Journal:J Biol Chem Volume:290Issue:(33):Pages:20117-27. doi: 10.1074/jbc.M115.652172.

Authors:Rose AS, and Hildebrand PW

Title:NGL Viewer: a web application for molecular visualization

Journal:Nucleic Acids Res Year:2015; Volume:43Issue:(W1):Pages:W576-W579.

Authors:Behrmann E, Loerke J, Budkevich TV, Yamamoto K, Schmidt A, Penczek PA, Vos MR, Bürger J, Mielke T, Scheerer P, Spahn CM

Title:Structural snapshots of actively translating human ribosomes

Journal:Cell Year:2015; Volume:161Issue:(4):Pages:845-57.

Authors:Velazquez Escobar F, Piwowarski P, Salewski J, Michael N, Fernandez Lopez M, Rupp A, Scheerer P, Bartl F, Frankenberg-Dinkel N, Siebert F, Mroginski MA, Hildebrandt P

Title:A protonation-coupled feedback mechanism controls the signaling process in bathy phytochromes

Journal:Nature Chemistry Year:2015; Volume:7Issue:(5):Pages:423-30.

Authors:Sommer ME, Elgeti M, Hildebrand PW, Szczepek M, Hofmann KP, Scheerer P

Title:Structure-based biophysical analysis of the interaction of rhodopsin with g protein and arrestin

Journal:Methods Enzymol Year:2015; Volume:556:Pages:563-608.

Authors:Scheerer P, Zhang F, Kalms J, von Stetten D, Krauss N, Oberpichler I, Lamparter T

Title:The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways

Journal:J Biol Chem Year:2015; Volume:290Issue:(18):Pages:11504-14.

Authors:Muhs M, Hilal T, Mielke T, Skabkin MA, Sanbonmatsu KY, Pestova TV, Spahn CM.

Title:Cryo-EM of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus IRES

Journal:Mol Cell Year:2015; Volume:S1097-2765Issue:(14):Pages:00965-4.

Authors:Kuhne J1, Eisenhauer K, Ritter E, Hegemann P, Gerwert K, Bartl F

Title:Early Formation of the Ion-Conducting Pore in Channelrhodopsin-2

Journal:Angew Chem Int Ed Engl Year:2014; Volume:54Issue:(16):Pages:4953-7.